Among those honoured were gold medalists in the last Commonwealth Games in Glasgow led by Blessing Okagbare and Power Lifting Championships in Dubai.
They received cash gifts of N2.5million each. Those who won silver medals got N1.5million each while bronze medalists got N1million each.
Jonathan announced the rewards during a dinner he organised in their honour at the Presidential Villa, Abuja.
Coaches at the two championships got N1million each while officials at the Commonwealth Games got N700,000 each.
Their counterparts in the Power Lifting received N500,000 each.
Jonathan also doled out N1million each to those who won gold medals in African Senior Wrestling championships; silver medalists got N750,000; Bronze medalists got N500,000; coaches and officials N1million and N250,000 each respectively.
The rewards announced for the African Junior championship were gold -N750,000; silver -N500,000; bronze -N250,000 each while coaches and officials got N750,000 and N250,000 each respectively.
Members of the national female Under-20 team that won silver in Canada, got N1million each, their head coach, N750,000 and officials N500,000 each.
Also rewarded were participants in African Team Athletic Championships in Morocco, African Youth Games in Botswana, Handball Team to Sweden as well as the country’s contingent to World Youth Games who were turned back by authorities in China over Ebola outbreak in Nigeria.
The athletes were given N500,000 each even though they had no opportunity to participate in the event.
Jonathan explained that the differences in the rewards for each category of sports men and women were based on the fact that some of the tournaments were more important than others.
He told the gathering that his administration was committed to ensuring that all sectors of national life were given the necessary motivation to achieve set goals.
The President recalled that the journey to winning of sports laurels was not an easy task.
He said, “Realising the significance of sports in national transformation, I took the decision to organise a retreat for the sports sector in 2012.
“This arose from my conviction that our outing at the 2012 Olympic Games did not represent full potential.
“Of course, if you look at the continent of Africa, we have the largest population; we are highest in terms of diversity and our economy is also the largest.
“In any competition in Africa, third position is not good enough for us because in all the other parameters we are never third.
“I am happy to note that things have progressively changed for the better since that retreat.”